BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H10SP1|AL425205
(278 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 532 e-151
>3x_Contig1622
Length = 13445
Score = 532 bits (264), Expect = e-151
Identities = 271/278 (97%)
Strand = Plus / Minus
Query: 1 ttcagcgacaaatgggtactttttgamaggcgggaagaaatggtctacaagttcattaat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2732 ttcagcgacaaatgggtactttttgacaggcgggaagaaatggtctacaagttcattaat 2673
Query: 61 atggatgtaggaacttttgtatmctgctagctctagtaattccatatgtacttccccatc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2672 atggatgtaggaacttttgtatcctgctagctctagtaattccatatgtacttccccatc 2613
Query: 121 agggttgatagtgaaaatamgagaacttggaatamcaacggttctatacgamaaggcatc 180
||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||
Sbjct: 2612 agggttgatagtgaaaatacgagaacttggaataccaacggttctatacgacaaggcatc 2553
Query: 181 tgtgatamgattgccaaaaccagcaataaaaggagttggcatctcatcagcatcatcttt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2552 tgtgatacgattgccaaaaccagcaataaaaggagttggcatctcatcagcatcatcttt 2493
Query: 241 tcggttattagattctgggaaatamaatgccttcatgt 278
|||||||||||||||||||||||| |||||||||||||
Sbjct: 2492 tcggttattagattctgggaaatacaatgccttcatgt 2455
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1422
Number of Sequences: 1807
Number of extensions: 1422
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 278
length of database: 10,358,551
effective HSP length: 15
effective length of query: 263
effective length of database: 10,331,446
effective search space: 2717170298
effective search space used: 2717170298
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)